One very clear bug in your solution is that you are printing extra 'space characters' in your solution which is probably not what the question asked. For example, in the first sample output, you are printing extra spaces in the lower 5 lines. You can solve this problem by using an arraylist of array to store the input and then output that arraylist.
Also, you should probably output a new line after every line of output. (You are not doing so for the last line of output.)
Here is a link to my accepted solution for this problem.
import java.io.*;
import java.math.*;
import java.util.*;
import java.lang.*;
public class Main{
public static InputStream inputStream = System.in;
public static OutputStream outputStream = System.out;
public static FastReader in = new FastReader(inputStream);
public static PrintWriter out = new PrintWriter(outputStream);
public static void main(String[] args)throws java.lang.Exception{
new Main().run();
out.close();
}
int N;
int M;
boolean[][] dfsNode;
StringTokenizer tk;
char[][] grid;
char[][] filled;
String[] sep;
void run()throws java.lang.Exception{
BufferedReader br = new BufferedReader(new InputStreamReader(System.in));
N = Integer.parseInt(br.readLine().trim());
sep = new String[N];
for(int i=0; i<N; i++){
ArrayList<char[]> al = new ArrayList<char[]>();
while(true){
String s = br.readLine();
if(s.contains("_")){
sep[i] = s;
break;
}
char[] arr = s.toCharArray();
al.add(arr);
}
grid = new char[al.size()][];
for(int j=0; j<al.size(); j++){
grid[j] = al.get(j);
}
// ArrayUtils.printGrid(grid);
int stari = -1;
int starj = -1;
for(int j=0; j<grid.length; j++){
for(int k=0; k<grid[j].length; k++){
if(grid[j][k] == '*'){
stari = j;
starj = k;
break;
}
}
}
dfsNode = new boolean[grid.length][];
filled = new char[grid.length][];
for(int j=0; j<grid.length; j++){
char[] arr = new char[grid[j].length];
for(int k=0; k<grid[j].length; k++){
arr[k] = grid[j][k];
}
filled[j] = arr;
dfsNode[j] = new boolean[grid[j].length];
}
fillColour(stari, starj);
for(int j=0; j<filled.length; j++){
for(int k=0; k<filled[j].length; k++){
if(filled[j][k] == '*'){
out.print(' ');
}else{
out.print(filled[j][k]);
}
}
out.println();
}
out.println(sep[i]);
}
}
void fillColour(int row, int col){
if(row<0 || row>=grid.length || col<0 || col>=grid[row].length){
return;
}
if(dfsNode[row][col]){
return;
}
// fill on border?
if(grid[row][col]!=' ' && grid[row][col]!='*'){
return;
}
filled[row][col] = '#';
dfsNode[row][col] = true;
fillColour(row-1, col);
fillColour(row+1, col);
fillColour(row, col-1);
fillColour(row, col+1);
}
}
class FastReader{
private boolean finished = false;
private InputStream stream;
private byte[] buf = new byte[1024];
private int curChar;
private int numChars;
private SpaceCharFilter filter;
public FastReader(InputStream stream){
this.stream = stream;
}
public int read(){
if (numChars == -1){
throw new InputMismatchException ();
}
if (curChar >= numChars){
curChar = 0;
try{
numChars = stream.read (buf);
} catch (IOException e){
throw new InputMismatchException ();
}
if (numChars <= 0){
return -1;
}
}
return buf[curChar++];
}
public int peek(){
if (numChars == -1){
return -1;
}
if (curChar >= numChars){
curChar = 0;
try{
numChars = stream.read (buf);
} catch (IOException e){
return -1;
}
if (numChars <= 0){
return -1;
}
}
return buf[curChar];
}
public int nextInt(){
int c = read ();
while (isSpaceChar (c))
c = read ();
int sgn = 1;
if (c == '-'){
sgn = -1;
c = read ();
}
int res = 0;
do{
if(c==','){
c = read();
}
if (c < '0' || c > '9'){
throw new InputMismatchException ();
}
res *= 10;
res += c - '0';
c = read ();
} while (!isSpaceChar (c));
return res * sgn;
}
public long nextLong(){
int c = read ();
while (isSpaceChar (c))
c = read ();
int sgn = 1;
if (c == '-'){
sgn = -1;
c = read ();
}
long res = 0;
do{
if (c < '0' || c > '9'){
throw new InputMismatchException ();
}
res *= 10;
res += c - '0';
c = read ();
} while (!isSpaceChar (c));
return res * sgn;
}
public String nextString(){
int c = read ();
while (isSpaceChar (c))
c = read ();
StringBuilder res = new StringBuilder ();
do{
res.appendCodePoint (c);
c = read ();
} while (!isSpaceChar (c));
return res.toString ();
}
public boolean isSpaceChar(int c){
if (filter != null){
return filter.isSpaceChar (c);
}
return isWhitespace (c);
}
public static boolean isWhitespace(int c){
return c == ' ' || c == '\n' || c == '\r' || c == '\t' || c == -1;
}
private String readLine0(){
StringBuilder buf = new StringBuilder ();
int c = read ();
while (c != '\n' && c != -1){
if (c != '\r'){
buf.appendCodePoint (c);
}
c = read ();
}
return buf.toString ();
}
public String nextLine(){
String s = readLine0 ();
while (s.trim ().length () == 0)
s = readLine0 ();
return s;
}
public String nextLine(boolean ignoreEmptyLines){
if (ignoreEmptyLines){
return nextLine ();
}else{
return readLine0 ();
}
}
public BigInteger nextBigInteger(){
try{
return new BigInteger (nextString ());
} catch (NumberFormatException e){
throw new InputMismatchException ();
}
}
public char nextCharacter(){
int c = read ();
while (isSpaceChar (c))
c = read ();
return (char) c;
}
public double nextDouble(){
int c = read ();
while (isSpaceChar (c))
c = read ();
int sgn = 1;
if (c == '-'){
sgn = -1;
c = read ();
}
double res = 0;
while (!isSpaceChar (c) && c != '.'){
if (c == 'e' || c == 'E'){
return res * Math.pow (10, nextInt ());
}
if (c < '0' || c > '9'){
throw new InputMismatchException ();
}
res *= 10;
res += c - '0';
c = read ();
}
if (c == '.'){
c = read ();
double m = 1;
while (!isSpaceChar (c)){
if (c == 'e' || c == 'E'){
return res * Math.pow (10, nextInt ());
}
if (c < '0' || c > '9'){
throw new InputMismatchException ();
}
m /= 10;
res += (c - '0') * m;
c = read ();
}
}
return res * sgn;
}
public boolean isExhausted(){
int value;
while (isSpaceChar (value = peek ()) && value != -1)
read ();
return value == -1;
}
public String next(){
return nextString ();
}
public SpaceCharFilter getFilter(){
return filter;
}
public void setFilter(SpaceCharFilter filter){
this.filter = filter;
}
public interface SpaceCharFilter{
public boolean isSpaceChar(int ch);
}
}