Have a look here:
header.stop().addClass("overlay-active")
content.removeClass("active");
the complete code is:
function Scroll() {
if(responsive_viewport >= 768) {
var e = $(this).scrollTop();
if(e < previousPos && e < 20) {
body.removeClass("b-content-pos");
content.removeClass("active");
okScroll = 0;
setTimeout(function () {
loaderLogo.addClass("active")
}, 500);
setTimeout(function () {
header.stop().delay(1e3).removeClass("overlay-active")
}, 1e3);
loaderLine.addClass("alt")
}
....