Could not open JPA EntityManager for transaction; org.hibernate.exception.GenericJDBCException: Could not open connection

Question

I am working on spring hibernate with jpa specification when my web application try to connect to database it gives the above exception Caused by: java.sql.SQLException: Access denied for user 'sandip'@'localhost' (using password: YES) , sandip is my linux user.

data source set is like.......

@Bean
public DataSource getDataSource() {     
DriverManagerDataSource ds = new DriverManagerDataSource(
            env.getProperty("url"));
    ds.setDriverClassName(env.getProperty("driver"));
    ds.setUsername(env.getProperty("user"));
    ds.setPassword(env.getProperty("pass"));

// Set up JPA and transactionManager

@Bean
public LocalContainerEntityManagerFactoryBean entityManagerFactory() {
    LocalContainerEntityManagerFactoryBean emf = new LocalContainerEntityManagerFactoryBean();
    emf.setDataSource(getDataSource());
    emf.setPackagesToScan("com.genesis.model");
    emf.getJpaPropertyMap().put("hibernate.dialect",
            env.getProperty("hibernate.dialect"));
    HibernateJpaVendorAdapter va = new HibernateJpaVendorAdapter();
    emf.setJpaVendorAdapter(va);
    return emf;
}

property file.........

driver=com.mysql.jdbc.Driver
url=jdbc:mysql://localhost:3306/test
hibernate.dialect=org.hibernate.dialect.MySQLDialect
user=root
pass=sandy1234

console output.

org.springframework.transaction.CannotCreateTransactionException: Could not open JPA EntityManager for transaction; nested exception is javax.persistence.PersistenceException: org.hibernate.exception.GenericJDBCException: Could not open connection
    at org.springframework.orm.jpa.JpaTransactionManager.doBegin(JpaTransactionManager.java:428)
    at org.springframework.transaction.support.AbstractPlatformTransactionManager.getTransaction(AbstractPlatformTransactionManager.java:372)
    at org.springframework.transaction.interceptor.TransactionAspectSupport.createTransactionIfNecessary(TransactionAspectSupport.java:417)
    at org.springframework.transaction.interceptor.TransactionAspectSupport.invokeWithinTransaction(TransactionAspectSupport.java:255)
    at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:94)
    at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172)
    at org.springframework.aop.framework.CglibAopProxy$DynamicAdvisedInterceptor.intercept(CglibAopProxy.java:631)
    at com.genesis.dao.GenesisDao$$EnhancerByCGLIB$$4943b8d.getOwners(<generated>)
    at com.genesis.controllers.AddPetForm.getOwners(AddPetForm.java:41)
    at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
    at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
    at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
    at java.lang.reflect.Method.invoke(Method.java:601)
    at org.springframework.web.method.support.InvocableHandlerMethod.invoke(InvocableHandlerMethod.java:219)
    at org.springframework.web.method.support.InvocableHandlerMethod.invokeForRequest(InvocableHandlerMethod.java:132)
    at org.springframework.web.method.annotation.ModelFactory.invokeModelAttributeMethods(ModelFactory.java:123)
    at org.springframework.web.method.annotation.ModelFactory.initModel(ModelFactory.java:97)
    at org.springframework.web.servlet.mvc.method.annotation.RequestMappingHandlerAdapter.invokeHandleMethod(RequestMappingHandlerAdapter.java:722)
    at org.springframework.web.servlet.mvc.method.annotation.RequestMappingHandlerAdapter.handleInternal(RequestMappingHandlerAdapter.java:686)
    at org.springframework.web.servlet.mvc.method.AbstractHandlerMethodAdapter.handle(AbstractHandlerMethodAdapter.java:80)
    at org.springframework.web.servlet.DispatcherServlet.doDispatch(DispatcherServlet.java:925)
    at org.springframework.web.servlet.DispatcherServlet.doService(DispatcherServlet.java:856)
    at org.springframework.web.servlet.FrameworkServlet.processRequest(FrameworkServlet.java:936)
    at org.springframework.web.servlet.FrameworkServlet.doGet(FrameworkServlet.java:827)
    at javax.servlet.http.HttpServlet.service(HttpServlet.java:707)
    at org.springframework.web.servlet.FrameworkServlet.service(FrameworkServlet.java:812)
    at javax.servlet.http.HttpServlet.service(HttpServlet.java:820)
    at org.mortbay.jetty.servlet.ServletHolder.handle(ServletHolder.java:511)
    at org.mortbay.jetty.servlet.ServletHandler.handle(ServletHandler.java:401)
    at org.mortbay.jetty.security.SecurityHandler.handle(SecurityHandler.java:216)
    at org.mortbay.jetty.servlet.SessionHandler.handle(SessionHandler.java:182)
    at org.mortbay.jetty.handler.ContextHandler.handle(ContextHandler.java:766)
    at org.mortbay.jetty.webapp.WebAppContext.handle(WebAppContext.java:450)
    at org.mortbay.jetty.handler.HandlerWrapper.handle(HandlerWrapper.java:152)
    at org.mortbay.jetty.Server.handle(Server.java:326)
    at org.mortbay.jetty.HttpConnection.handleRequest(HttpConnection.java:542)
    at org.mortbay.jetty.HttpConnection$RequestHandler.headerComplete(HttpConnection.java:928)
    at org.mortbay.jetty.HttpParser.parseNext(HttpParser.java:549)
    at org.mortbay.jetty.HttpParser.parseAvailable(HttpParser.java:212)
    at org.mortbay.jetty.HttpConnection.handle(HttpConnection.java:404)
    at org.mortbay.io.nio.SelectChannelEndPoint.run(SelectChannelEndPoint.java:410)
    at org.mortbay.thread.QueuedThreadPool$PoolThread.run(QueuedThreadPool.java:582)
2013-10-05 08:23:20.420:WARN::Nested in org.springframework.transaction.CannotCreateTransactionException: Could not open JPA EntityManager for transaction; nested exception is javax.persistence.PersistenceException: org.hibernate.exception.GenericJDBCException: Could not open connection:
java.sql.SQLException: Access denied for user 'sandip'@'localhost' (using password: YES)
    at com.mysql.jdbc.SQLError.createSQLException(SQLError.java:1078)
    at com.mysql.jdbc.MysqlIO.checkErrorPacket(MysqlIO.java:4190)
    at com.mysql.jdbc.MysqlIO.checkErrorPacket(MysqlIO.java:4122)
    at com.mysql.jdbc.MysqlIO.checkErrorPacket(MysqlIO.java:927)
    at com.mysql.jdbc.MysqlIO.proceedHandshakeWithPluggableAuthentication(MysqlIO.java:1709)
    at com.mysql.jdbc.MysqlIO.doHandshake(MysqlIO.java:1252)
    at com.mysql.jdbc.ConnectionImpl.coreConnect(ConnectionImpl.java:2486)
    at com.mysql.jdbc.ConnectionImpl.connectOneTryOnly(ConnectionImpl.java:2519)
    at com.mysql.jdbc.ConnectionImpl.createNewIO(ConnectionImpl.java:2304)
    at com.mysql.jdbc.ConnectionImpl.<init>(ConnectionImpl.java:834)
    at com.mysql.jdbc.JDBC4Connection.<init>(JDBC4Connection.java:47)
    at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
    at sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:57)
    at sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
    at java.lang.reflect.Constructor.newInstance(Constructor.java:525)
    at com.mysql.jdbc.Util.handleNewInstance(Util.java:411)
    at com.mysql.jdbc.ConnectionImpl.getInstance(ConnectionImpl.java:416)
    at com.mysql.jdbc.NonRegisteringDriver.connect(NonRegisteringDriver.java:346)
    at java.sql.DriverManager.getConnection(DriverManager.java:579)
    at java.sql.DriverManager.getConnection(DriverManager.java:190)
    at org.springframework.jdbc.datasource.DriverManagerDataSource.getConnectionFromDriverManager(DriverManagerDataSource.java:173)
    at org.springframework.jdbc.datasource.DriverManagerDataSource.getConnectionFromDriver(DriverManagerDataSource.java:164)
    at org.springframework.jdbc.datasource.AbstractDriverBasedDataSource.getConnectionFromDriver(AbstractDriverBasedDataSource.java:153)
    at org.springframework.jdbc.datasource.AbstractDriverBasedDataSource.getConnection(AbstractDriverBasedDataSource.java:119)
    at org.hibernate.engine.jdbc.connections.internal.DatasourceConnectionProviderImpl.getConnection(DatasourceConnectionProviderImpl.java:138)
    at org.hibernate.internal.AbstractSessionImpl$NonContextualJdbcConnectionAccess.obtainConnection(AbstractSessionImpl.java:357)
    at org.hibernate.engine.jdbc.internal.LogicalConnectionImpl.obtainConnection(LogicalConnectionImpl.java:227)
    at org.hibernate.engine.jdbc.internal.LogicalConnectionImpl.getConnection(LogicalConnectionImpl.java:170)
    at org.hibernate.engine.transaction.internal.jdbc.JdbcTransaction.doBegin(JdbcTransaction.java:67)
    at org.hibernate.engine.transaction.spi.AbstractTransactionImpl.begin(AbstractTransactionImpl.java:160)
    at org.hibernate.internal.SessionImpl.beginTransaction(SessionImpl.java:1427)
    at org.hibernate.jpa.internal.TransactionImpl.begin(TransactionImpl.java:61)
    at org.springframework.orm.jpa.DefaultJpaDialect.beginTransaction(DefaultJpaDialect.java:71)
    at org.springframework.orm.jpa.vendor.HibernateJpaDialect.beginTransaction(HibernateJpaDialect.java:61)
    at org.springframework.orm.jpa.JpaTransactionManager.doBegin(JpaTransactionManager.java:378)
    at org.springframework.transaction.support.AbstractPlatformTransactionManager.getTransaction(AbstractPlatformTransactionManager.java:372)
    at org.springframework.transaction.interceptor.TransactionAspectSupport.createTransactionIfNecessary(TransactionAspectSupport.java:417)
    at org.springframework.transaction.interceptor.TransactionAspectSupport.invokeWithinTransaction(TransactionAspectSupport.java:255)
    at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:94)
    at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172)
    at org.springframework.aop.framework.CglibAopProxy$DynamicAdvisedInterceptor.intercept(CglibAopProxy.java:631)
    at com.genesis.dao.GenesisDao$$EnhancerByCGLIB$$4943b8d.getOwners(<generated>)
    at com.genesis.controllers.AddPetForm.getOwners(AddPetForm.java:41)
    at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
    at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
    at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
    at java.lang.reflect.Method.invoke(Method.java:601)
    at org.springframework.web.method.support.InvocableHandlerMethod.invoke(InvocableHandlerMethod.java:219)
    at org.springframework.web.method.support.InvocableHandlerMethod.invokeForRequest(InvocableHandlerMethod.java:132)
    at org.springframework.web.method.annotation.ModelFactory.invokeModelAttributeMethods(ModelFactory.java:123)
    at org.springframework.web.method.annotation.ModelFactory.initModel(ModelFactory.java:97)
    at org.springframework.web.servlet.mvc.method.annotation.RequestMappingHandlerAdapter.invokeHandleMethod(RequestMappingHandlerAdapter.java:722)
    at org.springframework.web.servlet.mvc.method.annotation.RequestMappingHandlerAdapter.handleInternal(RequestMappingHandlerAdapter.java:686)
    at org.springframework.web.servlet.mvc.method.AbstractHandlerMethodAdapter.handle(AbstractHandlerMethodAdapter.java:80)
    at org.springframework.web.servlet.DispatcherServlet.doDispatch(DispatcherServlet.java:925)
    at org.springframework.web.servlet.DispatcherServlet.doService(DispatcherServlet.java:856)
    at org.springframework.web.servlet.FrameworkServlet.processRequest(FrameworkServlet.java:936)
    at org.springframework.web.servlet.FrameworkServlet.doGet(FrameworkServlet.java:827)
    at javax.servlet.http.HttpServlet.service(HttpServlet.java:707)
    at org.springframework.web.servlet.FrameworkServlet.service(FrameworkServlet.java:812)
    at javax.servlet.http.HttpServlet.service(HttpServlet.java:820)
    at org.mortbay.jetty.servlet.ServletHolder.handle(ServletHolder.java:511)
    at org.mortbay.jetty.servlet.ServletHandler.handle(ServletHandler.java:401)
    at org.mortbay.jetty.security.SecurityHandler.handle(SecurityHandler.java:216)
    at org.mortbay.jetty.servlet.SessionHandler.handle(SessionHandler.java:182)
    at org.mortbay.jetty.handler.ContextHandler.handle(ContextHandler.java:766)
    at org.mortbay.jetty.webapp.WebAppContext.handle(WebAppContext.java:450)
    at org.mortbay.jetty.handler.HandlerWrapper.handle(HandlerWrapper.java:152)
    at org.mortbay.jetty.Server.handle(Server.java:326)
    at org.mortbay.jetty.HttpConnection.handleRequest(HttpConnection.java:542)
    at org.mortbay.jetty.HttpConnection$RequestHandler.headerComplete(HttpConnection.java:928)
    at org.mortbay.jetty.HttpParser.parseNext(HttpParser.java:549)
    at org.mortbay.jetty.HttpParser.parseAvailable(HttpParser.java:212)
    at org.mortbay.jetty.HttpConnection.handle(HttpConnection.java:404)
    at org.mortbay.io.nio.SelectChannelEndPoint.run(SelectChannelEndPoint.java:410)
    at org.mortbay.thread.QueuedThreadPool$PoolThread.run(QueuedThreadPool.java:582)

Answer 1

i did some debugging come to the solution, i need to replace the entityManagerFactory() Bean with the following code

   @Bean
    public LocalContainerEntityManagerFactoryBean entityManagerFactory() {
        LocalContainerEntityManagerFactoryBean entityManagerFactoryBean = new LocalContainerEntityManagerFactoryBean();
        entityManagerFactoryBean.setDataSource(getDataSource());
        entityManagerFactoryBean.setPersistenceProviderClass(HibernatePersistence.class);
        entityManagerFactoryBean.setPackagesToScan(env.getRequiredProperty(PROPERTY_NAME_ENTITYMANAGER_PACKAGES_TO_SCAN));

        entityManagerFactoryBean.setJpaProperties(hibProperties());

        return entityManagerFactoryBean;
    }

    private Properties hibProperties() {
        Properties properties = new Properties();
        properties.put(PROPERTY_NAME_HIBERNATE_DIALECT, env.getRequiredProperty(PROPERTY_NAME_HIBERNATE_DIALECT));
        properties.put(PROPERTY_NAME_HIBERNATE_SHOW_SQL, env.getRequiredProperty(PROPERTY_NAME_HIBERNATE_SHOW_SQL));
        return properties;
    }

but i need to clarify HibernatePersistence class is deprecated now so what could be the alternative of this implementation