We had faced similar issues in the past and we had taken some preventive measures to stop such attacks though it can't guarantee to stop them completely but it showed significant measures in the reduction of such attacks.
- http://uksysadmin.wordpress.com/2011/03/21/protecting-ssh-against-brute-force-attacks/
- http://www.prolexic.com/knowledge-center-white-paper-ddos-mitigation-incident-response-plan-playbook.html
- https://serverfault.com/questions/340307/how-can-i-prevent-a-ddos-attack-on-amazon-ec2
Hope this helps.