I found some information about Blueprint Configuration in Fuse ESB
It states:
If you need to place your blueprint configuration files in a non-standard location (that is, somewhere other than OSGI-INF/blueprint/*.xml), you can specify a comma-separated list of alternative locations in the Bundle-Blueprint header in the manifest
For Example:
Bundle-Blueprint: lib/account.xml, security.bp, cnf/*.xml
I suggest, can you please give this a try, and specify your xml files here, naturally in the correct ordering.