Yo can invoke perl script from python using subprocess
module, piping its stdout and then analyzing it:
#!/usr/bin/env python
import subprocess
set1 = 'church#n#1'
set2 = 'temple#n#1'
cmd = ['perl', './sample.pl', set1, set2]
proc = subprocess.Popen(cmd, stdout=subprocess.PIPE)
for line in proc.stdout:
if 'Similarity' in line:
similarity = int(line.split("=")[-1])
print similarity