Okay, this is going to sound stupid.
1. sorry for not pasting the entire command, Walter and philshem. Perhaps it would have helped.
2. The entire command was :
mysqldump --insert-ignore --skip-add-drop-table --no-create-info --lock-tables=false -ucrbt_se -pcrbt_se -h10.2.2.150 blah master_backup --where "date(END_TIME)>='$FiveDays'" --result-file=torr1.sql
and Nano was wrapping the text around. As a result of the large size of the dump, I had never waited to see the error that MySQL threw in the end, which indicated the wrong parameter to the command.
2 days wasted. Damn.