I assume you have trajectory data, so that your spatial coordinates represent the trajectory through space of one or more particles. In that case:
Have a look at quiver3
or coneplot
.
If you want colored arrows, then have a look at quiver3d
or quiverc
(2D only) on the File Exchange.
If you only have 3 spatial coordinates and speed (= velocity magnitude), then your best bet is scatter3
.
I could go on, but could you give me a bit more detail on what you want exactly?