First, make sure that your project compiles correctly.
After that, go to C/C++ Build->Tool Chain Editor and choose Current toolchain: Linux GCC (you may need to switch off Display compatible toolchains only). Make sure that the Current builder is still Android Builder.
Now you have full access to C/C++ General->Paths and Symbols page, with h Includes and # Symbols tabs.
On these two tabs, I add manually
C:/Android/android-ndk-r9d/sources/cxx-stl/gnu-libstdc++/4.6/include
C:/Android/android-ndk-r9d/sources/cxx-stl/gnu-libstdc++/4.6/libs/armeabi/include
C:/Android/android-ndk-r9d/sources/cxx-stl/gnu-libstdc++/4.6/include/backward
and
__GXX_EXPERIMENTAL_CXX0X__ = 1
Maybe you need to switch to C/C++ Perspective, right-click on the project and launch Index->Rebuild.