Try this commands:
entity jpa --class ~.domain.EntityTable --identifierType ~.domain.EntityTablePk --entityName EntityTable --identifierField myPk --table TABLE field number --fieldName fkPkOne --type java.lang.Integer --column fk_entity_sub_one --class ~.domain.EntityTablePk field number --fieldName fkPkTwo --type java.lang.Integer --column fk_entity_sub_two --class ~.domain.EntityTablePk
And look at JPA Documentation