There's no point installing it in your site-packages directory. That only exists on your local machine, obviously: it won't be included when you deploy and you'd therefore get errors when you tried to import it in production. To prevent you from doing just that, the development server runs inside a sandbox that does not import from that directory either - and it also prevents you from tweaking sys.path.
Instead, just put it inside your project directory and import it from there.
Edit Actually, now I come to think of it, I don't think this will help you. You don't say what your subprocess32
module does, but if it's in any way related to the standard subprocess module, you simply won't be able to use it on GAE. There is no system for you to shell out to, and no way to execute arbitrary commands. You probably need to explain exactly what you're trying to do with that module.