node.js lacks most of the real asm.js performance tweaks that make emscripten fast. Instead of trying it with node, try it in firefox or chrome.
The issue is that node.js tends to lag behind chrome's V8 version, so features (or optimizations) that go into Chrome may take quite awhile to make it into V8. I don't actually know how long, but the asm.js optimizations are new enough that when I last tried it in early April, 2014 it was significantly slower on the command line with node.js than in the browser with Chrome, and Firefox was faster still.