Transitive dependencies are dependencies of your dependencies, so conflicts can occur when one or more versions of the same library are referenced. This is where the conflict manager functionality kicks in. By default, ivy will choose the most recent version, working on the assumption that most libraries are backwardly compatible. If you review the report generated by the report task you'll see the other version(s) marked as "evicted".
Your question appears to put forward an alternative mode of operation? Perhaps an example would help.