It seems that I have figured it out.
- Setting up 0th bit in the register PINMUX5 - selects function SPI1_SCS[1]
Setting up 4th bit in the register PINMUX5 - selects function SPI1_SCS[0]
EVMOMAPL138_pinmuxConfig(5, 0x00FFFFF0, 0x00111101); //enable chip select 1 EVMOMAPL138_pinmuxConfig(5, 0x00FFFFF0, 0x00111110); //enable chip select 0