There is no (direct) way to use a 4.0 assembly from a 3.5 project, by design.
You really either need to move your codebase (at least the main executable, and any libraries which need to reference Evernote) to 4.0.
The only alternative would be to try to backport their codebase to 3.5. However, that's potentially going to be difficult, especially if they're using 4.0 features.