Installing the igraph package for python

StackOverflow https://stackoverflow.com/questions/3856820

  •  27-09-2019
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Question

I have downloaded the igraph 0.5.4 tar ball for macosx Leopard 10.5.8. When I unpack it and then run:

sudo python setup.py install

I get the following long error message:

    Include path: /usr/include /usr/local/include
Library path: 
running install
running bdist_egg
running egg_info
writing python_igraph.egg-info/PKG-INFO
writing top-level names to python_igraph.egg-info/top_level.txt
writing dependency_links to python_igraph.egg-info/dependency_links.txt
reading manifest file 'python_igraph.egg-info/SOURCES.txt'
reading manifest template 'MANIFEST.in'
writing manifest file 'python_igraph.egg-info/SOURCES.txt'
installing library code to build/bdist.macosx-10.3-fat/egg
running install_lib
running build_py
creating build
creating build/lib.macosx-10.3-fat-2.6
creating build/lib.macosx-10.3-fat-2.6/igraph
copying igraph/__init__.py -> build/lib.macosx-10.3-fat-2.6/igraph
copying igraph/clustering.py -> build/lib.macosx-10.3-fat-2.6/igraph
copying igraph/colors.py -> build/lib.macosx-10.3-fat-2.6/igraph
copying igraph/configuration.py -> build/lib.macosx-10.3-fat-2.6/igraph
copying igraph/datatypes.py -> build/lib.macosx-10.3-fat-2.6/igraph
copying igraph/drawing.py -> build/lib.macosx-10.3-fat-2.6/igraph
copying igraph/formula.py -> build/lib.macosx-10.3-fat-2.6/igraph
copying igraph/layout.py -> build/lib.macosx-10.3-fat-2.6/igraph
copying igraph/statistics.py -> build/lib.macosx-10.3-fat-2.6/igraph
creating build/lib.macosx-10.3-fat-2.6/igraph/test
copying igraph/test/__init__.py -> build/lib.macosx-10.3-fat-2.6/igraph/test
copying igraph/test/attributes.py -> build/lib.macosx-10.3-fat-2.6/igraph/test
copying igraph/test/basic.py -> build/lib.macosx-10.3-fat-2.6/igraph/test
copying igraph/test/bipartite.py -> build/lib.macosx-10.3-fat-2.6/igraph/test
copying igraph/test/cliques.py -> build/lib.macosx-10.3-fat-2.6/igraph/test
copying igraph/test/colortests.py -> build/lib.macosx-10.3-fat-2.6/igraph/test
copying igraph/test/decomposition.py -> build/lib.macosx-10.3-fat-2.6/igraph/test
copying igraph/test/edgeseq.py -> build/lib.macosx-10.3-fat-2.6/igraph/test
copying igraph/test/flow.py -> build/lib.macosx-10.3-fat-2.6/igraph/test
copying igraph/test/foreign.py -> build/lib.macosx-10.3-fat-2.6/igraph/test
copying igraph/test/games.py -> build/lib.macosx-10.3-fat-2.6/igraph/test
copying igraph/test/generators.py -> build/lib.macosx-10.3-fat-2.6/igraph/test
copying igraph/test/isomorphism.py -> build/lib.macosx-10.3-fat-2.6/igraph/test
copying igraph/test/iterators.py -> build/lib.macosx-10.3-fat-2.6/igraph/test
copying igraph/test/layouts.py -> build/lib.macosx-10.3-fat-2.6/igraph/test
copying igraph/test/operators.py -> build/lib.macosx-10.3-fat-2.6/igraph/test
copying igraph/test/spectral.py -> build/lib.macosx-10.3-fat-2.6/igraph/test
copying igraph/test/structural.py -> build/lib.macosx-10.3-fat-2.6/igraph/test
copying igraph/test/vertexseq.py -> build/lib.macosx-10.3-fat-2.6/igraph/test
creating build/lib.macosx-10.3-fat-2.6/igraph/app
copying igraph/app/__init__.py -> build/lib.macosx-10.3-fat-2.6/igraph/app
copying igraph/app/shell.py -> build/lib.macosx-10.3-fat-2.6/igraph/app
running build_ext
building 'igraph.core' extension
creating build/temp.macosx-10.3-fat-2.6
creating build/temp.macosx-10.3-fat-2.6/src
gcc-4.0 -arch ppc -arch i386 -isysroot /Developer/SDKs/MacOSX10.4u.sdk -fno-strict-aliasing -fno-common -dynamic -DNDEBUG -g -O3 -I/usr/include -I/usr/local/include -I/usr/local/include -I/usr/include -I/Library/Frameworks/Python.framework/Versions/2.6/include/python2.6 -c src/arpackobject.c -o build/temp.macosx-10.3-fat-2.6/src/arpackobject.o
In file included from /usr/include/math.h:26,
                 from /Library/Frameworks/Python.framework/Versions/2.6/include/python2.6/pyport.h:235,
                 from /Library/Frameworks/Python.framework/Versions/2.6/include/python2.6/Python.h:58,
                 from src/arpackobject.h:27,
                 from src/arpackobject.c:24:
/usr/include/architecture/ppc/math.h:675: warning: conflicting types for built-in function ‘scalb’
In file included from src/arpackobject.c:24:
src/arpackobject.h:28:27: error: igraph/arpack.h: No such file or directory
In file included from src/arpackobject.h:29,
                 from src/arpackobject.c:24:
src/graphobject.h:28:27: error: igraph/igraph.h: No such file or directory
In file included from src/arpackobject.h:29,
                 from src/arpackobject.c:24:
src/graphobject.h:42: error: syntax error before ‘igraph_t’
src/graphobject.h:42: warning: no semicolon at end of struct or union
src/graphobject.h:44: error: ‘destructor’ redeclared as different kind of symbol
/Library/Frameworks/Python.framework/Versions/2.6/include/python2.6/object.h:304: error: previous declaration of ‘destructor’ was here
src/graphobject.h:51: error: syntax error before ‘}’ token
src/graphobject.h:51: warning: data definition has no type or storage class
src/graphobject.h:53: error: syntax error before ‘*’ token
src/graphobject.h:55: error: syntax error before ‘*’ token
src/graphobject.h:56: error: syntax error before ‘*’ token
src/graphobject.h:57: error: syntax error before ‘*’ token
src/graphobject.h:58: error: syntax error before ‘*’ token
src/graphobject.h:59: error: syntax error before ‘*’ token
src/graphobject.h:61: error: syntax error before ‘*’ token
src/graphobject.h:62: error: syntax error before ‘*’ token
src/graphobject.h:63: error: syntax error before ‘*’ token
src/graphobject.h:64: error: syntax error before ‘*’ token
src/graphobject.h:65: error: syntax error before ‘*’ token
src/graphobject.h:66: error: syntax error before ‘*’ token
src/graphobject.h:67: error: syntax error before ‘*’ token
src/graphobject.h:68: error: syntax error before ‘*’ token
src/graphobject.h:69: error: syntax error before ‘*’ token
src/graphobject.h:70: error: syntax error before ‘*’ token
src/graphobject.h:71: error: syntax error before ‘*’ token
src/graphobject.h:72: error: syntax error before ‘*’ token
src/graphobject.h:73: error: syntax error before ‘*’ token
src/graphobject.h:74: error: syntax error before ‘*’ token
src/graphobject.h:99: error: syntax error before ‘*’ token
src/graphobject.h:100: error: syntax error before ‘*’ token
src/graphobject.h:101: error: syntax error before ‘*’ token
src/graphobject.h:102: error: syntax error before ‘*’ token
src/graphobject.h:103: error: syntax error before ‘*’ token
src/graphobject.h:104: error: syntax error before ‘*’ token
src/graphobject.h:105: error: syntax error before ‘*’ token
src/graphobject.h:106: error: syntax error before ‘*’ token
src/graphobject.h:107: error: syntax error before ‘*’ token
src/graphobject.h:108: error: syntax error before ‘*’ token
src/graphobject.h:109: error: syntax error before ‘*’ token
src/graphobject.h:110: error: syntax error before ‘*’ token
src/graphobject.h:111: error: syntax error before ‘*’ token
src/graphobject.h:112: error: syntax error before ‘*’ token
src/graphobject.h:113: error: syntax error before ‘*’ token
src/graphobject.h:114: error: syntax error before ‘*’ token
src/graphobject.h:115: error: syntax error before ‘*’ token
src/graphobject.h:116: error: syntax error before ‘*’ token
src/graphobject.h:117: error: syntax error before ‘*’ token
src/graphobject.h:118: error: syntax error before ‘*’ token
src/graphobject.h:119: error: syntax error before ‘*’ token
src/graphobject.h:120: error: syntax error before ‘*’ token
src/graphobject.h:121: error: syntax error before ‘*’ token
src/graphobject.h:122: error: syntax error before ‘*’ token
src/graphobject.h:123: error: syntax error before ‘*’ token
src/graphobject.h:124: error: syntax error before ‘*’ token
src/graphobject.h:125: error: syntax error before ‘*’ token
src/graphobject.h:126: error: syntax error before ‘*’ token
src/graphobject.h:127: error: syntax error before ‘*’ token
src/graphobject.h:129: error: syntax error before ‘*’ token
src/graphobject.h:130: error: syntax error before ‘*’ token
src/graphobject.h:131: error: syntax error before ‘*’ token
src/graphobject.h:132: error: syntax error before ‘*’ token
src/graphobject.h:133: error: syntax error before ‘*’ token
src/graphobject.h:134: error: syntax error before ‘*’ token
src/graphobject.h:135: error: syntax error before ‘*’ token
src/graphobject.h:136: error: syntax error before ‘*’ token
src/graphobject.h:137: error: syntax error before ‘*’ token
src/graphobject.h:138: error: syntax error before ‘*’ token
src/graphobject.h:139: error: syntax error before ‘*’ token
src/graphobject.h:140: error: syntax error before ‘*’ token
src/graphobject.h:142: error: syntax error before ‘*’ token
src/graphobject.h:143: error: syntax error before ‘*’ token
src/graphobject.h:144: error: syntax error before ‘*’ token
src/graphobject.h:145: error: syntax error before ‘*’ token
src/graphobject.h:147: error: syntax error before ‘*’ token
src/graphobject.h:156: error: syntax error before ‘*’ token
src/graphobject.h:157: error: syntax error before ‘*’ token
src/graphobject.h:158: error: syntax error before ‘*’ token
src/graphobject.h:159: error: syntax error before ‘*’ token
src/graphobject.h:160: error: syntax error before ‘*’ token
src/graphobject.h:161: error: syntax error before ‘*’ token
src/graphobject.h:162: error: syntax error before ‘*’ token
src/graphobject.h:164: error: syntax error before ‘*’ token
src/graphobject.h:165: error: syntax error before ‘*’ token
src/graphobject.h:166: error: syntax error before ‘*’ token
src/graphobject.h:167: error: syntax error before ‘*’ token
src/graphobject.h:168: error: syntax error before ‘*’ token
src/graphobject.h:169: error: syntax error before ‘*’ token
src/graphobject.h:170: error: syntax error before ‘*’ token
src/graphobject.h:172: error: syntax error before ‘*’ token
src/graphobject.h:173: error: syntax error before ‘*’ token
src/graphobject.h:174: error: syntax error before ‘*’ token
src/graphobject.h:175: error: syntax error before ‘*’ token
src/graphobject.h:176: error: syntax error before ‘*’ token
src/graphobject.h:177: error: syntax error before ‘*’ token
src/graphobject.h:179: error: syntax error before ‘*’ token
src/graphobject.h:180: error: syntax error before ‘*’ token
src/graphobject.h:182: error: syntax error before ‘*’ token
src/graphobject.h:183: error: syntax error before ‘*’ token
src/graphobject.h:184: error: syntax error before ‘*’ token
src/graphobject.h:185: error: syntax error before ‘*’ token
src/graphobject.h:186: error: syntax error before ‘*’ token
src/graphobject.h:187: error: syntax error before ‘*’ token
src/graphobject.h:188: error: syntax error before ‘*’ token
src/graphobject.h:190: error: syntax error before ‘*’ token
src/graphobject.h:191: error: syntax error before ‘*’ token
src/graphobject.h:193: error: syntax error before ‘*’ token
src/graphobject.h:194: error: syntax error before ‘*’ token
src/graphobject.h:196: error: syntax error before ‘*’ token
src/graphobject.h:197: error: syntax error before ‘*’ token
src/graphobject.h:198: error: syntax error before ‘*’ token
src/graphobject.h:199: error: syntax error before ‘*’ token
src/graphobject.h:200: error: syntax error before ‘*’ token
src/graphobject.h:201: error: syntax error before ‘*’ token
src/graphobject.h:202: error: syntax error before ‘*’ token
src/graphobject.h:203: error: syntax error before ‘*’ token
src/graphobject.h:205: error: syntax error before ‘*’ token
src/graphobject.h:206: error: syntax error before ‘*’ token
src/graphobject.h:207: error: syntax error before ‘*’ token
src/graphobject.h:208: error: syntax error before ‘*’ token
src/graphobject.h:209: error: syntax error before ‘*’ token
src/graphobject.h:211: error: syntax error before ‘*’ token
src/graphobject.h:213: error: syntax error before ‘*’ token
src/graphobject.h:214: error: syntax error before ‘*’ token
In file included from src/arpackobject.c:24:
src/arpackobject.h:43: error: syntax error before ‘igraph_arpack_options_t’
src/arpackobject.h:43: warning: no semicolon at end of struct or union
src/arpackobject.h:44: warning: data definitiIn file included from src/arpackobject.c:24:
src/arpackobject.h:28:27: error: igraph/arpack.h: No such file or directory
In file included from src/arpackobject.h:29,
                 from src/arpackobject.c:24:
src/graphobject.h:28:27: error: igraph/igraph.h: No such file or directory
on has no type or storage class
src/arpackobject.h:45: warning: data definition has no type or storage class
In file included from src/arpackobject.h:29,
                 from src/arpackobject.c:24:
src/graphobject.h:42: error: syntax error before ‘igraph_t’
src/graphobject.h:42: warning: no semicolon at end of struct or union
src/graphobject.h:44: error: ‘destructor’ redeclared as different kind of symbolsrc/arpackobject.h:49: error: syntax error before ‘*’ token
/Library/Frameworks/Python.framework/Versions/2.6/include/python2.6/object.h:304: error: previous declaration of ‘destructor’ was here

src/graphobject.h:51: error: syntax error before ‘}’ token
src/graphobject.h:51: warning: data definition has no type or storage class
src/graphobject.h:53: error: syntax error before ‘*’ token
src/arpackobject.h:52: error: syntax error before ‘*’ token
src/arpackobject.h:54: error: syntax error before ‘*’ token
src/arpackobject.h:54: error: syntax error before ‘*’ token
src/arpackobject.h:54: warning: data definition has no type or storage class
src/graphobject.h:55: error: syntax error before ‘*’ token
src/graphobject.h:56: error: syntax error before ‘*’ token
src/graphobject.h:57: error: syntax error before ‘*’ token
src/graphobject.h:58: error: syntax error before ‘*’ token
src/graphobject.h:59: error: syntax error before ‘*’ token
src/graphobject.h:61: error: syntax error before ‘*’ token
src/graphobject.h:62: error: syntax error before ‘*’ token
src/arpackobject.c: In function ‘igraphmodule_ARPACKOptions_new’:src/graphobject.h:63: error: syntax error before ‘*’ token

src/arpackobject.c:44: error: ‘self’ undeclared (first use in this function)
src/arpackobject.c:44: error: (Each undeclared identifier is reported only once
src/arpackobject.c:44: error: for each function it appears in.)
src/arpackobject.c:45: error: syntax error before ‘)’ tokensrc/graphobject.h:64: error: syntax error before ‘*’ token
src/graphobject.h:65: error: syntax error before ‘*’ token

src/arpackobject.c: At top level:src/graphobject.h:66: error: syntax error before ‘*’ token
src/arpackobject.c:59: error: syntax error before ‘*’ token

src/arpackobject.c: In function ‘igraphmodule_ARPACKOptions_dealloc’:
src/arpackobject.c:61: error: ‘self’ undeclared (first use in this function)src/graphobject.h:67: error: syntax error before ‘*’ token

src/arpackobject.c: At top level:
src/graphobject.h:68: error: syntax error before ‘*’ token
src/graphobject.h:69: error: syntax error before ‘*’ tokensrc/arpackobject.c:68: error: syntax error before ‘*’ token

src/arpackobject.c: In function ‘igraphmodule_ARPACKOptions_getattr’:src/graphobject.h:70: error: syntax error before ‘*’ token
src/arpackobject.c:71: error: ‘attrname’ undeclared (first use in this function)

src/graphobject.h:71: error: syntax error before ‘*’ tokensrc/arpackobject.c:72: error: ‘self’ undeclared (first use in this function)
src/graphobject.h:72: error: syntax error before ‘*’ token

src/graphobject.h:73: error: syntax error before ‘*’ token
src/graphobject.h:74: error: syntax error before ‘*’ token
src/graphobject.h:99: error: syntax error before ‘*’ token
src/graphobject.h:100: error: syntax error before ‘*’ token
src/graphobject.h:101: error: syntax error before ‘*’ token
src/graphobject.h:102: error: syntax error before ‘*’ token
src/graphobject.h:103: error: syntax error before ‘*’ token
src/graphobject.h:104: error: syntax error before ‘*’ token
src/graphobject.h:105: error: syntax error before ‘*’ token
src/graphobject.h:106: error: syntax error before ‘*’ token
src/graphobject.h:107: error: syntax error before ‘*’ token
src/arpackobject.c: At top level:src/graphobject.h:108: error: syntax error before ‘*’ token

src/arpackobject.c:122: error: syntax error before ‘*’ token
src/graphobject.h:109: error: syntax error before ‘*’ token
src/arpackobject.c: In function ‘igraphmodule_ARPACKOptions_setattr’:
src/graphobject.h:110: error: syntax error before ‘*’ tokensrc/arpackobject.c:124: error: ‘value’ undeclared (first use in this function)

src/arpackobject.c:128: error: ‘attrname’ undeclared (first use in this function)src/graphobject.h:111: error: syntax error before ‘*’ token

src/graphobject.h:112: error: syntax error before ‘*’ tokensrc/arpackobject.c:132: error: ‘self’ undeclared (first use in this function)
src/graphobject.h:113: error: syntax error before ‘*’ token

src/graphobject.h:114: error: syntax error before ‘*’ token
src/arpackobject.c:143: error: ‘igraph_real_t’ undeclared (first use in this function)src/graphobject.h:115: error: syntax error before ‘*’ token
src/graphobject.h:116: error: syntax error before ‘*’ token

src/arpackobject.c:143: error: syntax error before ‘PyInt_AsLong’
src/graphobject.h:117: error: syntax error before ‘*’ token
src/arpackobject.c:145: error: syntax error before ‘PyFloat_AsDouble’
src/graphobject.h:118: error: syntax error before ‘*’ token
src/graphobject.h:119: error: syntax error before ‘*’ token
src/graphobject.h:120: error: syntax error before ‘*’ token
src/arpackobject.c: At top level:src/graphobject.h:121: error: syntax error before ‘*’ token
src/graphobject.h:122: error: syntax error before ‘*’ token

src/arpackobject.c:159: error: syntax error before ‘*’ token
src/arpackobject.c:160: error: syntax error before ‘*’ token
src/graphobject.h:123: error: syntax error before ‘*’ token
src/arpackobject.c: In function ‘igraphmodule_ARPACKOptions_get’:
src/arpackobject.c:161: error: ‘self’ undeclared (first use in this function)
src/graphobject.h:124: error: syntax error before ‘*’ token
src/arpackobject.c: At top level:
src/arpackobject.c:179: error: syntax error before ‘*’ token
src/graphobject.h:125: error: syntax error before ‘*’ token
src/graphobject.h:126: error: syntax error before ‘*’ token
src/graphobject.h:127: error: syntax error before ‘*’ token
src/graphobject.h:129: error: syntax error before ‘*’ token
src/graphobject.h:130: error: syntax error before ‘*’ token
src/arpackobject.c:220: error: initializer element is not constantsrc/graphobject.h:131: error: syntax error before ‘*’ token
src/arpackobject.c:220: error: (near initialization for ‘igraphmodule_ARPACKOptionsType.tp_dealloc’)

src/arpackobject.c:220: error: syntax error before ‘igraphmodule_ARPACKOptions_dealloc’
src/graphobject.h:132: error: syntax error before ‘*’ token
src/graphobject.h:133: error: syntax error before ‘*’ token
src/graphobject.h:134: error: syntax error before ‘*’ token
src/graphobject.h:135: error: syntax error before ‘*’ token
src/graphobject.h:136: error: syntax error before ‘*’ token
src/graphobject.h:137: error: syntax error before ‘*’ token
src/graphobject.h:138: error: syntax error before ‘*’ token
src/graphobject.h:139: error: syntax error before ‘*’ token
src/graphobject.h:140: error: syntax error before ‘*’ token
src/graphobject.h:142: error: syntax error before ‘*’ token
src/graphobject.h:143: error: syntax error before ‘*’ token
src/graphobject.h:144: error: syntax error before ‘*’ token
src/graphobject.h:145: error: syntax error before ‘*’ token
src/graphobject.h:147: error: syntax error before ‘*’ token
src/graphobject.h:156: error: syntax error before ‘*’ token
src/graphobject.h:157: error: syntax error before ‘*’ token
src/graphobject.h:158: error: syntax error before ‘*’ token
src/graphobject.h:159: error: syntax error before ‘*’ token
src/graphobject.h:160: error: syntax error before ‘*’ token
src/graphobject.h:161: error: syntax error before ‘*’ token
src/graphobject.h:162: error: syntax error before ‘*’ token
src/graphobject.h:164: error: syntax error before ‘*’ token
src/graphobject.h:165: error: syntax error before ‘*’ token
src/graphobject.h:166: error: syntax error before ‘*’ token
src/graphobject.h:167: error: syntax error before ‘*’ token
src/graphobject.h:168: error: syntax error before ‘*’ token
src/graphobject.h:169: error: syntax error before ‘*’ token
src/graphobject.h:170: error: syntax error before ‘*’ token
src/graphobject.h:172: error: syntax error before ‘*’ token
src/graphobject.h:173: error: syntax error before ‘*’ token
src/graphobject.h:174: error: syntax error before ‘*’ token
src/graphobject.h:175: error: syntax error before ‘*’ token
src/graphobject.h:176: error: syntax error before ‘*’ token
src/graphobject.h:177: error: syntax error before ‘*’ token
src/graphobject.h:179: error: syntax error before ‘*’ token
src/graphobject.h:180: error: syntax error before ‘*’ token
src/graphobject.h:182: error: syntax error before ‘*’ token
src/graphobject.h:183: error: syntax error before ‘*’ token
src/graphobject.h:184: error: syntax error before ‘*’ token
src/graphobject.h:185: error: syntax error before ‘*’ token
src/graphobject.h:186: error: syntax error before ‘*’ token
src/graphobject.h:187: error: syntax error before ‘*’ token
src/graphobject.h:188: error: syntax error before ‘*’ token
src/graphobject.h:190: error: syntax error before ‘*’ token
src/graphobject.h:191: error: syntax error before ‘*’ token
src/graphobject.h:193: error: syntax error before ‘*’ token
src/graphobject.h:194: error: syntax error before ‘*’ token
src/graphobject.h:196: error: syntax error before ‘*’ token
src/graphobject.h:197: error: syntax error before ‘*’ token
src/graphobject.h:198: error: syntax error before ‘*’ token
src/graphobject.h:199: error: syntax error before ‘*’ token
src/graphobject.h:200: error: syntax error before ‘*’ token
src/graphobject.h:201: error: syntax error before ‘*’ token
src/graphobject.h:202: error: syntax error before ‘*’ token
src/graphobject.h:203: error: syntax error before ‘*’ token
src/graphobject.h:205: error: syntax error before ‘*’ token
src/graphobject.h:206: error: syntax error before ‘*’ token
src/graphobject.h:207: error: syntax error before ‘*’ token
src/graphobject.h:208: error: syntax error before ‘*’ token
src/graphobject.h:209: error: syntax error before ‘*’ token
src/graphobject.h:211: error: syntax error before ‘*’ token
src/graphobject.h:213: error: syntax error before ‘*’ token
src/graphobject.h:214: error: syntax error before ‘*’ token
In file included from src/arpackobject.c:24:
src/arpackobject.h:43: error: syntax error before ‘igraph_arpack_options_t’
src/arpackobject.h:43: warning: no semicolon at end of struct or union
src/arpackobject.h:44: warning: data definition has no type or storage class
src/arpackobject.h:45: warning: data definition has no type or storage class
src/arpackobject.h:49: error: syntax error before ‘*’ token
src/arpackobject.h:52: error: syntax error before ‘*’ token
src/arpackobject.h:54: error: syntax error before ‘*’ token
src/arpackobject.h:54: error: syntax error before ‘*’ token
src/arpackobject.h:54: warning: data definition has no type or storage class
src/arpackobject.c: In function ‘igraphmodule_ARPACKOptions_new’:
src/arpackobject.c:44: error: ‘self’ undeclared (first use in this function)
src/arpackobject.c:44: error: (Each undeclared identifier is reported only once
src/arpackobject.c:44: error: for each function it appears in.)
src/arpackobject.c:45: error: syntax error before ‘)’ token
src/arpackobject.c: At top level:
src/arpackobject.c:59: error: syntax error before ‘*’ token
src/arpackobject.c: In function ‘igraphmodule_ARPACKOptions_dealloc’:
src/arpackobject.c:61: error: ‘self’ undeclared (first use in this function)
src/arpackobject.c: At top level:
src/arpackobject.c:68: error: syntax error before ‘*’ token
src/arpackobject.c: In function ‘igraphmodule_ARPACKOptions_getattr’:
src/arpackobject.c:71: error: ‘attrname’ undeclared (first use in this function)
src/arpackobject.c:72: error: ‘self’ undeclared (first use in this function)
src/arpackobject.c: At top level:
src/arpackobject.c:122: error: syntax error before ‘*’ token
src/arpackobject.c: In function ‘igraphmodule_ARPACKOptions_setattr’:
src/arpackobject.c:124: error: ‘value’ undeclared (first use in this function)
src/arpackobject.c:128: error: ‘attrname’ undeclared (first use in this function)
src/arpackobject.c:132: error: ‘self’ undeclared (first use in this function)
src/arpackobject.c:143: error: ‘igraph_real_t’ undeclared (first use in this function)
src/arpackobject.c:143: error: syntax error before ‘PyInt_AsLong’
src/arpackobject.c:145: error: syntax error before ‘PyFloat_AsDouble’
src/arpackobject.c: At top level:
src/arpackobject.c:159: error: syntax error before ‘*’ token
src/arpackobject.c:160: error: syntax error before ‘*’ token
src/arpackobject.c: In function ‘igraphmodule_ARPACKOptions_get’:
src/arpackobject.c:161: error: ‘self’ undeclared (first use in this function)
src/arpackobject.c: At top level:
src/arpackobject.c:179: error: syntax error before ‘*’ token
src/arpackobject.c:220: error: initializer element is not constant
src/arpackobject.c:220: error: (near initialization for ‘igraphmodule_ARPACKOptionsType.tp_dealloc’)
src/arpackobject.c:220: error: syntax error before ‘igraphmodule_ARPACKOptions_dealloc’
lipo: can't figure out the architecture type of: /var/folders/dh/dhQ69HGyEnCzfiZ9fG+NKE+++TI/-Tmp-//cci7rbrc.out
error: command 'gcc-4.0' failed with exit status 1

Is this a bug or am i doing something wrong?

Best, Thomas

Was it helpful?

Solution

What you have downloaded is only the Python interface to the igraph library. The library itself is written in C, and you will have to install the C core of igraph first before trying to compile the Python interface.

Basically, you have three choices here:

  1. Try to make use of the pre-compiled Mac OS X installer of igraph that is found on the PyPI page of igraph.

  2. Compile and install the C core first and then try again with the compilation of the Python first. The source code of the C core can be downloaded from the igraph homepage.

  3. Install brew and then install the C core of igraph using brew from the command line:

    $ brew install igraph

    The above command will download, compile and install the C core of igraph for you, after which you can continue with the compilation of the Python interface.

OTHER TIPS

I had the same problem but the above solution did not work on my mac os X Lion. I couldn't install igraph from the C source code. After looking everywhere I found the solution for the latter posted by Tamas somewhere else. So here is the whole thing that I had to do:

D1. install python2.6

D2. download the source files for the C library for igraph

D3. replace the following 6 source files

src/DensityGrid.cpp

src/DensityGrid.h

src/DensityGrid_3d.cpp

src/DensityGrid_3d.h

with the corresponding files found at

http://bazaar.launchpad.net/~igraph/igraph/0.6-main/revision/2387#src/DensityGrid.cpp

D4. Run the following commands inside the igrpah-0.5.4/ directory

./configure

make

make install

D5. download the source code to install the python extension for igraph

D6. install it running the command from python-igraph-0.5.4

sudo python2.6 setup.py install

and remember to use python2.6 to run it.

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