XML Signature core validation consists of 2 phases:
- reference validation
- signature validation
Reference validation is the verification of the message digest of each of the references(URIs) in the XML Signature.
Signature validation is the verification of the signature over the signed contents, or the SignedInfo element.
Both phases must pass for the XML signature to be valid.
In your case, the the reference validation passed, but the Signature validation failed, ie. the signature element was tampered and the reference element or the URI signed wasn't.
So ultimately the core Signature validation failed.