It appears that I have found the solution to this.
I created a new console project in an attempt to recreate the issue. Added the package that I was using originally and it was added without version information!
I could not see any odd settings on my previous project so started messing around. I was able to recreate the issue with the following steps. 1) add the nuget package to your project 2) build 3) uninstall the nuget package 4) reinstall the nuget package
This 4th step makes the package install into your project with version information.
What this all boils down to, is that if you have assemblies already in your bin folder and you attempt to add (or uninstall and reinstall) your new references will be added to the project with version information.
The solution is to make sure that you always clean your solution before dealing with nuget.