Since you wanted it as an answer :
http://fftw.org/doc/What-FFTW-Really-Computes.html (The web adress is explicit enough, I think).
Generally, I find the doc of FFTW to be quite useful, but it is cluttered with little details that you need to know.
For instance, before closing a program, one should call fftw_cleanup()
to prevent some memory leaks.