AFAIK poi only works on the file system, so there is no interaction through Real-Time Data. I think you should not edit the xlsx
file while it is still open in excel if you want to prevent corruption.
If you want to use RTD, you should try to find java bindings for that. I think they are COM based, so maybe JACOB can help you. http://sourceforge.net/projects/jacob-project/
See also this discussion: http://sourceforge.net/p/jacob-project/discussion/375946/thread/946012e8/
Oh. Btw. COM is Windows only, so I would stay on Windows :)