I'm assuming you are using job.setInputFormatClass(ColumnFamilyInputFormat.class);
Instead, try using job.setInputFormatClass(CqlPagingInputFormat.class);
The Mapper input for this is Map<String, ByteBuffer>, Map<String,ByteBuffer>
Similarly, if you need to write out to Cassandra us CqlPagingOutputFormat and the appropriate output types.
See http://www.datastax.com/dev/blog/cql3-table-support-in-hadoop-pig-and-hive for more info.