Destroying the body to end the movement of it is not the best solution. You should only remove the body if you really don't want it to be part of the simulation any more.
There are several options for stopping the body's movement:
1 - Set its linear velocity to 0. This will bring it to an immediate stop. If something else is pushing on it (e.g. contact wit body), you will have to decide what to do.
body->SetLinearVelocity(b2Vec2(0,0)));
2 - Set its linear/angular damping to 0. This will dissipate the momentum it has so it will slowly stop. The factor you use should be greater than 0. The body will come to a halt more quickly with larger values and it will be resistant to movement from other bodies (if they bump it, it will slow down and stop again). Remember to turn the linear/angular damping back to 0 when you want the body to start moving.
body->SetLinearDamping(0.2);
body->SetAngularDamping(0.2);
3 - Give it a target position to seek to and set the position as the place you want it to be. This is basically a feedback control loop where you are applying a force to get it to move towards where you want the body to stay. It can be used to make a body follow paths, etc. The code below is part of a larger code base (you can see it here), but you should be able to get the general idea. This function applies thrust to the object so that it pushes towards a target.
void MovingEntity::ApplyThrust()
{
// Get the distance to the target.
b2Vec2 toTarget = GetTargetPos() - GetBody()->GetWorldCenter();
toTarget.Normalize();
b2Vec2 desiredVel = GetMaxSpeed()*toTarget;
b2Vec2 currentVel = GetBody()->GetLinearVelocity();
b2Vec2 thrust = GetMaxLinearAcceleration()*(desiredVel - currentVel);
GetBody()->ApplyForceToCenter(thrust);
}