As Karaf is a OSGi Container, you should first read some stuff on how to write proper OSGi bundles. First of all you'll need a Activator that'll start your bundle (just like a main). A Main Class is never interpreted. Yes Karaf, as it is a OSGi container, does "read" the Manifest, but to make sure first it's a proper OSGi bundle second how the resolving should take place by reading Package-Import/-Export.
Regarding the "Packaging" - using lot's of other jar's/bunldes - , you'd either can built a custom Karaf (read the Karaf documentation on how to do this) or create a KAR for your Bundles containing your bundles and a feature.xml (again take a look at the documentation at Karaf)