For MPICH (or any MPI implementation) to work, you need to have passwordless SSH set up. I should also mention that you really shouldn't have to be logged in as root to make this work. It's generally a very bad idea to be logged in as root all of the time.
Unable to execute MPICH2 on multiple machines on ubuntu 12.04 (HYDU_sock_connect issue)
Pergunta
I am facing difficulty in executing MPI program on two machines. The OS is Ubuntu 12.04. And the MPI implementation is MPICH2
ssh is working fine:
root@ubuntu:/home# ssh 192.168.1.9
root@gpuguy's password:
Welcome to Ubuntu 12.04.3 LTS (GNU/Linux 3.8.0-29-generic i686)
* Documentation: https://help.ubuntu.com/
131 packages can be updated.
67 updates are security updates.
Last login: Thu Oct 24 17:36:25 2013 from ubuntu.local
root@gpuguy:~#
But when I run my MPI programs it fails:
root@ubuntu:/home# mpiexec -f hosts.cfg -n 4 hello
root@192.168.1.9's password:
[proxy:0:0@gpuguy] HYDU_sock_connect (./utils/sock/sock.c:171): unable to get host address for ubuntu (1)
[proxy:0:0@gpuguy] main (./pm/pmiserv/pmip.c:209): unable to connect to server ubuntu at port 42104 (check for firewalls!)
I have already disabled firewall on both machines that is the reason I can do ssh successfully. But how to solve this issue?
My MPI code runs successfully on single machine.
Solução
Outras dicas
In /etc/hosts file, add ip address of each server and its hostname. You should do this for all the servers.
for example:
10.10.0.5 server1
10.10.0.6 server2
10.10.0.7 server3
Just check in /etc/hosts file, not use tab (\t) instead of space to separate between ip address and hostname.
This is wrong:
10.10.0.5 \t server1
This is true:
10.10.0.5 server1
Be careful to not delete or modify existed lines in /etc/hosts file. only add new lines at end of file.
Also, you do not need to disable firewall to fix this issue.