WSO2 Stratos 1.5.2 and WSO2 Stratos 1.6 (ESB 4.5.1) are NOT backward compatible. If you want to migrate form 1.5.2 to 1.6 based platform, you need to do a data migration.
The reason for changing from 0 to -1234 is a design decision made to avoid possible mix-up with super tenant and other tenants.