You can plot a heatmap of a one-column dataset with image
:
library(graphics)
mat <- matrix(c(-1, -1, -.9, -.8, -.2, .3, .6, .7, .8, 1))
image(mat)
Вопрос
I'm new to R and i want to generate a one row heatmap from my data using heatmap.2 as reported in "Widespread dynamic DNA methylation in response to biotic stress", Figure 3C (Dowen et al., 2012). The following is a link to the article: pnas.org/content/109/32/E2183/1
My effective data is just a column with values between -1 and 1:
deltaMeth
-1
-1
-0.9
-0.8
-0.2
0.3
0.6
0.7
0.8
1
My goal is to create a heatmap similar to the reported by (Dowen et al., 2012) using my dataset.
Thanks.
Решение
You can plot a heatmap of a one-column dataset with image
:
library(graphics)
mat <- matrix(c(-1, -1, -.9, -.8, -.2, .3, .6, .7, .8, 1))
image(mat)