I would modify this line in the plugin:
https://github.com/mindmup/editable-table/blob/master/mindmup-editabletable.js#L115
to:
$(window).on('resize.mindmup', function () {
Now, when you want to remove that event, remove it by namespace.
$(window).off("resize.mindmup");
Continue removing and re-creating the table, then use the above line to remove the window resize event before re-initializing the plugin.